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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1390062 chr8:15276184 C/T PPP2R2A chr8:26149007-26230196:+ 0.77 6.74 5.91E-11 Box Plot
BLCA rs1390062 chr8:15276184 C/T R3HCC1 chr8:23127633-23153792:+ 0.82 7.58 2.67E-13 Box Plot
BLCA rs1390062 chr8:15276184 C/T REEP4 chr8:21995533-21999464:- 0.67 6.18 1.64E-9 Box Plot
BLCA rs1390062 chr8:15276184 C/T TMEM66 chr8:29920528-29939940:- 0.74 6.87 2.69E-11 Box Plot
BLCA rs1390062 chr8:15276184 C/T TNFRSF10A chr8:23047965-23082639:- 0.65 6.35 6.12E-10 Box Plot
BLCA rs1390062 chr8:15276184 C/T TNKS chr8:9413424-9639856:+ 0.7 7.01 1.11E-11 Box Plot
BLCA rs1390062 chr8:15276184 C/T TRIM35 chr8:27142404-27168836:- 0.89 7.66 1.58E-13 Box Plot
BLCA rs1390062 chr8:15276184 C/T VPS37A chr8:17104080-17159936:+ 0.83 7.08 7.11E-12 Box Plot
BLCA rs1390062 chr8:15276184 C/T WRN chr8:30891317-31031285:+ 0.69 6.51 2.35E-10 Box Plot
BLCA rs1390062 chr8:15276184 C/T XPO7 chr8:21777182-21864096:+ 0.84 6.98 1.32E-11 Box Plot
BLCA rs139133366 chr4:163961056 T/TAAC KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.09 2.76E-9 Box Plot
BLCA rs139217586 chr14:39843269 CAG/C LOC647288 chr13:75811890-75814517:- -0.4 -6.26 1.02E-9 Box Plot
BLCA rs1393889 chr15:97372064 A/G ASB7 chr15:101142739-101191910:+ 0.76 7.02 9.87E-12 Box Plot
BLCA rs1393889 chr15:97372064 A/G EFTUD1 chr15:82422571-82555104:- 0.77 6.77 4.85E-11 Box Plot
BLCA rs1393889 chr15:97372064 A/G PRC1 chr15:91509268-91538859:- 0.4 6.02 4.15E-9 Box Plot